Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929416.1_cds_XP_016476703.1_68506
CDS Infomation

[gene=LOC107798243] [db_xref=GeneID:107798243] [protein=regulatory protein NPR5-like isoform X2] [protein_id=XP_016476703.1] [location=join(260..739,1477..2460)] [gbkey=CDS]
Sequence

ATGACTCCTGAAGACTCCTTAAGAACTCTCTCTTCAGATTATCTCAATCTTCTCATCAAC
GGTCAAGCTTTTAGTGATGTTACTTTCAGTGTTGAAGGTCGTTTAGTTCATGCTCATAAA
TGCATCTTAGCTGCTAGGAGTCTTTTCTTTAGGAAATTCTTTTGTGGGCCGGAGTCACCC
GGTGGCAGCTGCGGCCCAAGGATAAGCCCCTTCAGCGGCGGACTAGCATCGTCGCCGAGG
GGCACGAGTGGTTCACAGGTGATACCTGTGAACACAGTAGGGTATGAAGTTTTCTTGTTG
ATGCTTCAATTTTTGTACAGTGGACAAGTTTCAATTGTTCCACAAAAACATGAACCAAGG
CCTAATTGTGGGGAGAGAAGCTGTTGGCATACACATTGCACCTCAGCCGTTGATCTTGCC
CTTGATACTCTTGCAGCCGCTAGATCTTTTGGTGTGGAACAGCTCGCTTTGCTCACTCAG
AAGCAATTGACAAGCATGGTGGAGAAGGCTTCAATTGAAGATGTGATGAAAGTTTTAATA
GCTTCAAGAAAACAAGACATGCACCAACTTTGGACTAGTTGTTCTCATTTAGTTGCAAAA
TCAGGCCTCCCACCAGAAATCTTAGTCAAACACCTCCCTATTGATGTTGTAGCCAAAATT
GAAGATCTCCGTCTCAAATCCTCCATATCACGAACAAGATCATTAATCCCTCATCACCAC
CACCACGAAATTCCTTCGACCATTGAGCTGGAGGACCATAAAATTCGACGAATGAGACGA
GCCCTTGACTCGTCAGACGTTGAACTTGTCAAGCTTATGGTAATGGGAGAAGGCCTAAAT
CTTGATGAATCACTCGCATTGCATTATGCTGTGGAGAATTGCAGCCGGGAAGTAGTGAAA
GCGCTACTCGAGCTTGGTGCAGCTGATGTGAACTATCAGGCCGGCCCCAACGGCAAAAGC
TCGCTTCACTTAGCAGCTGAAATGGTGTCACCTGACATGGTCGCAGTTCTATTGGACCAT
CATGCTGACCCGAACGTTCAAACCATGGATGGGATCACTCCACTCGATATTCTCAGAACC
CTAACGTCTGATTTTCTATTTAAGGGTGCTATCCCCGGACTCACTCACATTGAACCGAAT
AAGTTAAGACTTTGCCTAGAACTTGTTCAATCAGCAGCAATGGTAATATCTAGAGAGGAA
GGAGAAGCGAATAATAATCCGTCTTCGGATAATATATATCCTCCACATGTTCGTGAAGAT
CATAGTTCTAGTACAAGCAGTGGGAACAACAATTTGGGAAACTTAAACGTGGATTCAAGA
ATGGTGTATTTAAATCTTGGTGCAGCACCTCATCATCAAATGGCATGCAAAATGAATGAA
GGAGATCAACATGATTGCAGCAGCAGCCACAATACCCAGAATCCAGCATCAATGTACCAC
CACCACCATTCTCATGAGTATTAA

Peptide Sequence

PEP ID

XP_016476703.1
PEP Infomation

PREDICTED: regulatory protein NPR5-like isoform X2 [Nicotiana tabacum]
Sequence

MTPEDSLRTLSSDYLNLLINGQAFSDVTFSVEGRLVHAHKCILAARSLFFRKFFCGPESP
GGSCGPRISPFSGGLASSPRGTSGSQVIPVNTVGYEVFLLMLQFLYSGQVSIVPQKHEPR
PNCGERSCWHTHCTSAVDLALDTLAAARSFGVEQLALLTQKQLTSMVEKASIEDVMKVLI
ASRKQDMHQLWTSCSHLVAKSGLPPEILVKHLPIDVVAKIEDLRLKSSISRTRSLIPHHH
HHEIPSTIELEDHKIRRMRRALDSSDVELVKLMVMGEGLNLDESLALHYAVENCSREVVK
ALLELGAADVNYQAGPNGKSSLHLAAEMVSPDMVAVLLDHHADPNVQTMDGITPLDILRT
LTSDFLFKGAIPGLTHIEPNKLRLCLELVQSAAMVISREEGEANNNPSSDNIYPPHVRED
HSSSTSSGNNNLGNLNVDSRMVYLNLGAAPHHQMACKMNEGDQHDCSSSHNTQNPASMYH
HHHSHEY

Transcript Sequence

Gene sequence data has not been registered.